STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C806_01641Hypothetical protein. (480 aa)    
Predicted Functional Partners:
C806_01640
Hypothetical protein.
 
 0.929
C806_01639
Hypothetical protein.
 
 0.917
C806_01136
Maltose/maltodextrin transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.791
C806_00356
Hypothetical protein.
 
 0.712
C806_01637
Hypothetical protein.
 
     0.674
C806_00624
Hypothetical protein.
 
 0.664
C806_01896
Multiple sugar transport system permease.
 
 0.659
C806_02572
Hypothetical protein.
 
 0.659
C806_01336
lactose/L-arabinose transport system permease; Overlaps another CDS with the same product name.
 
 0.654
C806_01335
lactose/L-arabinose transport system permease; Overlaps another CDS with the same product name.
 
 0.644
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.