STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C806_01643Hypothetical protein. (253 aa)    
Predicted Functional Partners:
C806_01645
Hypothetical protein.
 
    0.968
C806_01644
Hypothetical protein.
 
  0.954
C806_01646
Hypothetical protein.
 
     0.907
C806_01833
Hypothetical protein.
  
 
 0.628
C806_03381
Hypothetical protein.
 
  0.585
C806_01431
Hypothetical protein.
 
  0.569
C806_02077
Hypothetical protein.
 
  0.569
C806_03319
Hypothetical protein.
 
  0.555
C806_04010
Hypothetical protein.
 
  0.554
C806_04226
Hypothetical protein.
 
  0.552
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.