STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C806_01673Hypothetical protein. (321 aa)    
Predicted Functional Partners:
C806_01674
Hypothetical protein.
 
  
 0.940
C806_01675
PadR family transcriptional regulator, regulatory protein PadR.
 
     0.878
C806_01672
Hypothetical protein.
  
  
 0.831
C806_02312
Hypothetical protein.
  
     0.736
C806_00639
Hypothetical protein.
  
 
   0.648
C806_01925
Hypothetical protein.
  
 
   0.611
C806_03152
Hypothetical protein.
  
     0.591
C806_03863
Hypothetical protein.
  
 
   0.550
C806_02220
Hypothetical protein.
  
     0.526
C806_02525
Hypothetical protein.
  
     0.519
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.