STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_01720Hypothetical protein. (337 aa)    
Predicted Functional Partners:
C806_01724
Hypothetical protein.
 
  
 0.947
C806_01722
Hypothetical protein.
 
 
 0.945
C806_01721
PTS system, mannose/fructose/sorbose family, IID component.
 
 
 0.923
C806_01723
Hypothetical protein.
 
 
 0.922
C806_04452
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
     
  0.869
C806_02576
N-acetylglucosamine-6-phosphate deacetylase.
  
 
 0.798
C806_01663
Hypothetical protein.
     
  0.741
C806_04063
Hypothetical protein.
     
  0.741
nagB
Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
    
 0.671
carA
Carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family.
  
  
  0.667
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.