STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_01758Hypothetical protein. (640 aa)    
Predicted Functional Partners:
C806_01163
Hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 0.936
C806_00317
Hypothetical protein.
    
   0.708
C806_01219
Hypothetical protein; Belongs to the peptidase S8 family.
    
   0.708
C806_01802
Hypothetical protein.
    
   0.708
C806_02245
Hypothetical protein.
    
   0.708
C806_02543
Hypothetical protein.
    
   0.708
C806_02579
Hypothetical protein.
 
 
   0.595
C806_03489
Hypothetical protein.
   
 0.561
C806_03994
Hypothetical protein.
   
 0.561
C806_01757
Hypothetical protein.
       0.525
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.