STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_01800txe/YoeB family addiction module toxin. (87 aa)    
Predicted Functional Partners:
C806_01799
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
 0.994
C806_04015
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
 0.973
C806_00398
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
 0.783
C806_03485
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
 0.783
C806_03723
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
 0.783
C806_02608
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
  
 0.742
C806_02607
RelE/StbE family addiction module toxin.
    
 0.699
C806_00448
RelB/DinJ family addiction module antitoxin.
 
  
 0.672
C806_04759
Hypothetical protein.
     
 0.669
C806_00720
Hypothetical protein.
     
 0.630
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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