STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_01898Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family. (496 aa)    
Predicted Functional Partners:
C806_02407
PTS system, glucose subfamily, IIA component.
 
 
 0.950
C806_02198
PTS system, sucrose-specific IIBC component.
 
 
 0.946
C806_02528
PTS system, glucose subfamily, IIA component.
 
 
 0.937
C806_03518
PTS system, beta-glucoside-specific IIABC component.
 
 
 0.920
C806_00170
PTS system, Fru family, IIC component.
   
 
 0.919
C806_01736
PTS system, Fru family, IIC component.
   
 
 0.919
C806_01732
PTS system, glucose subfamily, IIA component.
  
 
 0.900
C806_02529
PTS system, glucose-like IIB component.
 
 
 0.879
C806_01321
Hypothetical protein.
 
 
 0.863
C806_00004
PTS system, glucose-like IIB component.
 
 
 0.853
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.