STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_01901Hypothetical protein. (341 aa)    
Predicted Functional Partners:
C806_01899
Hypothetical protein.
 
  
 0.954
C806_01900
Hypothetical protein.
 
  
 0.934
C806_03306
TdcF protein.
     
 0.671
C806_01301
Hypothetical protein.
     
  0.592
C806_01302
Hypothetical protein.
     
  0.592
C806_01898
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
       0.491
C806_01896
Multiple sugar transport system permease.
 
     0.418
C806_01895
Multiple sugar transport system permease.
 
     0.417
C806_02018
Type 2 lantibiotic biosynthesis protein LanM.
  
     0.416
C806_02013
Type 2 lantibiotic biosynthesis protein LanM.
  
     0.401
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.