Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_01919Phosphoglucomutase. (577 aa)    
Predicted Functional Partners:
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
 
 
 0.892
C806_03311
UTP-glucose-1-phosphate uridylyltransferase.
    
 0.892
C806_01962
Glucose-1-phosphate adenylyltransferase, GlgD subunit; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
  
 
 0.889
C806_03192
Glucose-1-phosphate adenylyltransferase, GlgD subunit.
  
 
 0.889
C806_00170
PTS system, Fru family, IIC component.
  
 
 0.881
C806_01736
PTS system, Fru family, IIC component.
  
 
 0.881
C806_01732
PTS system, glucose subfamily, IIA component.
     
 0.842
C806_02198
PTS system, sucrose-specific IIBC component.
     
 0.842
C806_02407
PTS system, glucose subfamily, IIA component.
     
 0.842
C806_02528
PTS system, glucose subfamily, IIA component.
     
 0.842
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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