STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C806_01966Hypothetical protein. (333 aa)    
Predicted Functional Partners:
C806_01965
DnaD domain-containing protein.
 
    0.931
C806_01178
Hypothetical protein.
  
     0.726
C806_01967
Ribose-phosphate diphosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family.
       0.687
C806_00457
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.
  
 
 0.647
C806_01037
Hypothetical protein.
 
   
 0.566
C806_02449
Hypothetical protein.
  
   
 0.565
C806_02330
Hypothetical protein.
  
 
 
 0.545
murC
UDP-N-acetylmuramate-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
     0.506
C806_03312
Hypothetical protein.
  
     0.495
C806_02626
Hypothetical protein.
  
     0.462
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.