STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_01971Hypothetical protein. (354 aa)    
Predicted Functional Partners:
C806_01968
Hypothetical protein.
 
 
 0.997
C806_01972
Hypothetical protein.
 
 0.996
C806_01969
ABC transporter ATP-binding protein.
 
 
 
 0.969
C806_04460
Hypothetical protein.
  
 0.942
C806_02366
Hypothetical protein.
   
 
 0.818
C806_02365
Hypothetical protein.
    
 0.809
C806_03810
Hypothetical protein.
  
 0.808
C806_00393
Hypothetical protein.
 
 
 0.766
C806_01973
Hypothetical protein.
    
  0.747
C806_02760
Hypothetical protein.
    
  0.729
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.