STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_02016Hypothetical protein. (186 aa)    
Predicted Functional Partners:
C806_02018
Type 2 lantibiotic biosynthesis protein LanM.
  
  
 0.799
C806_02017
Hypothetical protein.
       0.727
C806_02019
Hypothetical protein.
       0.573
C806_02020
Hypothetical protein.
       0.573
C806_02021
Hypothetical protein.
       0.562
C806_02015
Hypothetical protein.
    
 0.437
C806_02671
Hypothetical protein.
    
 0.437
C806_02013
Type 2 lantibiotic biosynthesis protein LanM.
   
  
 0.434
C806_04487
Type 2 lantibiotic biosynthesis protein LanM.
   
  
 0.434
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.