STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C806_02022Hypothetical protein. (698 aa)    
Predicted Functional Partners:
C806_01890
Hypothetical protein.
  
    0.983
C806_02028
Hypothetical protein.
 
 
 0.942
C806_02037
Hypothetical protein.
 
 
 0.935
atpF
ATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
 
 0.914
C806_04437
Hypothetical protein.
 
 
0.913
C806_00702
Hypothetical protein.
 
 
0.912
C806_03064
Hypothetical protein.
 
 
 0.901
C806_02036
Hypothetical protein.
 
 
 0.898
C806_03050
Hypothetical protein.
  
  
 0.895
C806_04881
Hypothetical protein.
  
  
 0.895
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.