STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_02030Transketolase; Overlaps another CDS with the same product name. (279 aa)    
Predicted Functional Partners:
C806_02029
Transketolase; Overlaps another CDS with the same product name.
 0.999
C806_02760
Hypothetical protein.
  
 0.990
C806_01124
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.971
tal
Fructose-6-phosphate aldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
 
  
 0.890
C806_04452
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
     
 0.869
C806_01732
PTS system, glucose subfamily, IIA component.
    
  0.833
C806_02198
PTS system, sucrose-specific IIBC component.
    
  0.833
C806_02407
PTS system, glucose subfamily, IIA component.
    
  0.833
C806_02528
PTS system, glucose subfamily, IIA component.
    
  0.833
C806_03518
PTS system, beta-glucoside-specific IIABC component.
    
  0.833
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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