STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C806_02065X-X-X-Leu-X-X-Gly heptad repeats protein. (839 aa)    
Predicted Functional Partners:
C806_02066
Hypothetical protein.
   
 0.950
C806_02064
Hypothetical protein; Probably functions as a manganese efflux pump.
 
     0.711
C806_04368
Hypothetical protein.
   
 0.682
C806_04367
Hypothetical protein.
 
   
 0.637
C806_02067
Hypothetical protein.
 
  
 0.523
C806_03830
Hypothetical protein.
 
 
  0.409
C806_03828
Hypothetical protein.
 
     0.402
C806_03831
Hypothetical protein.
 
 
  0.401
C806_01702
Hypothetical protein.
  
     0.400
C806_02585
SrtB family sortase.
  
   
 0.400
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.