STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_02187Hypothetical protein. (44 aa)    
Predicted Functional Partners:
C806_04452
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
 0.945
C806_00170
PTS system, Fru family, IIC component.
  
 
 0.866
C806_01736
PTS system, Fru family, IIC component.
  
 
 0.866
C806_01781
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.764
C806_02463
Hypothetical protein.
    
 0.728
C806_01732
PTS system, glucose subfamily, IIA component.
     
 0.723
C806_02198
PTS system, sucrose-specific IIBC component.
     
 0.723
C806_02407
PTS system, glucose subfamily, IIA component.
     
 0.723
C806_02528
PTS system, glucose subfamily, IIA component.
     
 0.723
C806_03518
PTS system, beta-glucoside-specific IIABC component.
     
 0.723
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.