STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_02246SpoIID/LytB domain-containing protein. (754 aa)    
Predicted Functional Partners:
C806_02247
YihY family inner membrane protein; Belongs to the UPF0761 family.
       0.790
C806_01073
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
  
 0.655
C806_02248
S-DNA-T family DNA segregation ATPase FtsK/SpoIIIE.
     
 0.569
C806_01916
Sporulation protein YabP.
 
   
 0.554
C806_01569
Hypothetical protein.
   
    0.519
C806_03003
Hypothetical protein.
   
    0.519
C806_03649
Hypothetical protein.
   
    0.519
C806_03650
Hypothetical protein.
   
    0.519
C806_03664
Hypothetical protein.
   
    0.519
C806_04239
Hypothetical protein.
   
    0.519
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.