STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_02259Hypothetical protein. (285 aa)    
Predicted Functional Partners:
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
    
 0.906
C806_04452
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
  0.903
C806_00170
PTS system, Fru family, IIC component.
     
  0.869
C806_01736
PTS system, Fru family, IIC component.
     
  0.869
C806_01781
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.729
C806_01732
PTS system, glucose subfamily, IIA component.
    
  0.726
C806_02198
PTS system, sucrose-specific IIBC component.
    
  0.726
C806_02407
PTS system, glucose subfamily, IIA component.
    
  0.726
C806_02528
PTS system, glucose subfamily, IIA component.
    
  0.726
C806_03518
PTS system, beta-glucoside-specific IIABC component.
    
  0.726
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.