STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_02438Hypothetical protein. (746 aa)    
Predicted Functional Partners:
C806_02434
Cell division protein FtsW; Belongs to the SEDS family.
 
 0.980
C806_02433
Hypothetical protein.
 
 0.975
C806_02327
Hypothetical protein; Belongs to the SEDS family.
 
 0.969
C806_02217
Hypothetical protein; Belongs to the SEDS family.
 
 0.951
C806_01914
Cell division protein FtsL.
 
 0.922
C806_02728
1A family penicillin-binding protein.
 
 
 0.917
C806_04170
1A family penicillin-binding protein.
 
 
0.877
C806_01034
Hypothetical protein.
  
 0.870
C806_02439
Hypothetical protein.
 
     0.866
murD
UDP-N-acetylmuramoylalanine-D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
 
  
 0.847
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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