STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_02469Hypothetical protein. (380 aa)    
Predicted Functional Partners:
C806_02470
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region.
 
 0.999
C806_02122
Hypothetical protein.
  
 0.883
C806_03470
Hypothetical protein.
 
  
 
0.883
C806_04551
Zinc transport system permease.
  
  
 0.870
C806_01059
Hypothetical protein.
    
 0.847
C806_03331
Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein.
  
 
  0.843
C806_03473
Hypothetical protein.
     
 0.843
C806_00385
Phosphate binding protein.
     
 0.842
C806_03735
Hypothetical protein.
  
  
 0.834
C806_01651
Molybdenum cofactor biosynthesis protein C.
   
 
  0.828
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.