Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_02488Hypothetical protein. (61 aa)    
Predicted Functional Partners:
C806_00980
Hypothetical protein.
    
 0.800
C806_02487
Hypothetical protein.
  
  
 0.704
C806_01043
ferredoxin-NADP+ reductase.
   
 
 0.650
pyrK
Dihydroorotate dehydrogenase electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).
   
 
 0.650
C806_02478
Hypothetical protein.
    
  0.599
C806_04452
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
  
 0.561
C806_01298
Hypothetical protein.
    
   0.507
C806_02489
Hypothetical protein.
       0.486
C806_01161
Hypothetical protein.
    
   0.485
C806_01206
Hypothetical protein.
    
   0.485
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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