STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_02619PTS system, glucose-like IIB component. (288 aa)    
Predicted Functional Partners:
C806_02618
PTS system, glucose subfamily, IIA component.
     0.994
C806_02528
PTS system, glucose subfamily, IIA component.
 0.975
C806_00591
PTS system, glucose subfamily, IIA component.
 
     0.937
C806_02620
Trehalose operon repressor.
 
   
 0.869
C806_02530
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
 
 
 0.798
C806_02617
Alpha,alpha-phosphotrehalase.
 
 
 0.750
C806_03518
PTS system, beta-glucoside-specific IIABC component.
 
0.717
C806_02407
PTS system, glucose subfamily, IIA component.
 
0.706
C806_01732
PTS system, glucose subfamily, IIA component.
 
 0.693
C806_02198
PTS system, sucrose-specific IIBC component.
 
0.680
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.