Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_02765Hypothetical protein. (253 aa)    
Predicted Functional Partners:
C806_00576
Hypothetical protein.
 
 0.924
C806_00575
Hypothetical protein.
 
 
 0.920
C806_02755
Hypothetical protein.
    
 0.807
C806_02754
Hypothetical protein.
  
 
  0.798
C806_02764
Hypothetical protein.
  
    0.784
C806_02746
Hypothetical protein.
   
 0.765
C806_02760
Hypothetical protein.
  
   0.755
C806_02762
TDP-4-keto-6-deoxy-D-glucose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
    
 0.743
C806_02757
Hypothetical protein.
   
 0.739
C806_02763
Sialic acid O-acetyltransferase NeuD family sugar O-acyltransferase.
     
 0.735
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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