STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C806_03053Hypothetical protein. (95 aa)    
Predicted Functional Partners:
C806_03385
PTS system, mannitol-specific IIC component.
  
 
 0.874
C806_02185
Hypothetical protein; Belongs to the glycosyl hydrolase 1 family.
 
 
 0.820
C806_03517
Hypothetical protein; Belongs to the glycosyl hydrolase 1 family.
 
 
 0.818
C806_03054
Hypothetical protein.
       0.773
C806_01947
Hypothetical protein; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.766
C806_03279
Beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.766
C806_00171
1-phosphofructokinase family hexose kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
  
 0.733
C806_01731
Hypothetical protein.
 
  
 0.733
C806_01737
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
  
 0.694
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
   
    0.611
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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