STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C806_03099Hypothetical protein. (104 aa)    
Predicted Functional Partners:
cinA
Competence/damage-inducible protein CinA domain; Belongs to the CinA family.
    
 0.519
C806_04311
Hypothetical protein.
  
     0.519
C806_04452
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
  0.510
C806_04759
Hypothetical protein.
 
 
 0.510
C806_04307
Hypothetical protein.
  
     0.501
C806_03100
Hypothetical protein.
       0.497
C806_03101
Lactaldehyde reductase.
       0.497
C806_03951
Chemotaxis protein CheY.
    
  0.470
C806_03589
Hypothetical protein.
  
     0.459
C806_04277
Hypothetical protein.
  
     0.457
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.