STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_03154Hypothetical protein. (387 aa)    
Predicted Functional Partners:
C806_00576
Hypothetical protein.
  
 0.911
C806_00575
Hypothetical protein.
   
 0.909
C806_03155
Hypothetical protein.
       0.832
C806_03785
Geranylgeranyl diphosphate synthase, type II; Belongs to the FPP/GGPP synthase family.
    
 0.683
C806_00923
Hypothetical protein.
   
 0.668
C806_02746
Hypothetical protein.
   
 0.668
C806_04461
Hypothetical protein.
     
 0.615
C806_02639
Hypothetical protein.
     
  0.572
C806_02579
Hypothetical protein.
   
 0.565
C806_00574
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
     
 0.563
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.