STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_03173Hypothetical protein. (283 aa)    
Predicted Functional Partners:
C806_03174
Hypothetical protein.
 
     0.944
C806_03172
Hypothetical protein.
 
    0.939
C806_02470
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region.
    
 0.810
C806_03831
Hypothetical protein.
 
 
 0.690
C806_05111
Hypothetical protein.
 
 
 0.686
C806_03830
Hypothetical protein.
 
 
  0.681
C806_03331
Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein.
     
  0.680
C806_01618
Hypothetical protein.
 
    0.647
C806_03535
Hypothetical protein.
 
   0.638
C806_00270
Hypothetical protein.
  
 
 0.636
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.