STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C806_03212Hypothetical protein. (235 aa)    
Predicted Functional Partners:
C806_03222
Hypothetical protein.
 
 
  0.863
C806_02359
Hypothetical protein.
 
  
  0.767
C806_01772
Hypothetical protein.
 
 
  0.757
C806_04727
Hypothetical protein.
  
 
  0.753
C806_04648
Hypothetical protein.
 
 
  0.746
C806_03106
Hypothetical protein.
  
  
  0.744
C806_02870
Hypothetical protein.
 
 
  0.743
C806_03407
Hypothetical protein.
 
  
  0.743
C806_00864
Hypothetical protein.
  
 
  0.736
C806_04385
Hypothetical protein.
 
  
  0.732
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.