STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C806_03214Acyl carrier protein. (82 aa)    
Predicted Functional Partners:
C806_00575
Hypothetical protein.
  
 0.999
C806_04062
Hypothetical protein.
   
 0.992
C806_00576
Hypothetical protein.
  
 0.991
C806_04452
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
   
 0.957
rplU
50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
   
 
 0.884
C806_02518
NADH-quinone oxidoreductase subunit E.
   
 0.881
C806_03987
Malonyl CoA-acyl carrier protein transacylase.
  
 0.873
C806_04476
Malonyl CoA-acyl carrier protein transacylase.
  
 0.873
C806_01461
Hypothetical protein.
   
 0.870
C806_02579
Hypothetical protein.
   
 
 0.849
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.