STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C806_03225Hypothetical protein. (190 aa)    
Predicted Functional Partners:
C806_03224
Hypothetical protein; Belongs to the glycosyl hydrolase 3 family.
 
     0.866
C806_03223
Hypothetical protein.
 
     0.857
C806_03222
Hypothetical protein.
 
     0.831
C806_03221
Hypothetical protein.
 
     0.668
C806_03212
Hypothetical protein.
 
     0.645
C806_03425
Hypothetical protein.
  
     0.628
C806_03280
Hypothetical protein.
  
     0.543
C806_01836
Hypothetical protein.
  
     0.483
C806_00473
Hypothetical protein.
  
     0.482
C806_00361
Hypothetical protein.
  
     0.473
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.