STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_03232Hypothetical protein; Belongs to the CoA-transferase III family. (401 aa)    
Predicted Functional Partners:
C806_04452
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
 0.907
C806_03231
Hypothetical protein; Belongs to the CoA-transferase III family.
 
    
0.784
C806_03234
carnitinyl-CoA dehydratase.
 
 
 0.769
C806_04498
acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
     
  0.733
C806_04482
Hypothetical protein.
 
 
  0.720
C806_02463
Hypothetical protein.
     
 0.716
C806_00576
Hypothetical protein.
     
 0.715
C806_01814
Hypothetical protein.
 
 
 0.701
C806_00575
Hypothetical protein.
     
 0.672
C806_01426
Hypothetical protein.
     
  0.668
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.