STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_03280Hypothetical protein. (493 aa)    
Predicted Functional Partners:
C806_03278
Hypothetical protein; Belongs to the glycosyl hydrolase 2 family.
 
 
 0.794
C806_03277
Hypothetical protein.
 
    0.765
C806_04541
Hypothetical protein; Belongs to the glycosyl hydrolase 2 family.
 
 
 0.709
C806_04539
Hypothetical protein.
 
     0.657
C806_03287
Hypothetical protein.
 
     0.585
C806_03279
Beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
 
     0.571
C806_02574
Hypothetical protein.
  
     0.568
C806_04540
Sugar (Glycoside-Pentoside-Hexuronide) transporter.
  
     0.560
C806_03225
Hypothetical protein.
  
     0.543
C806_03223
Hypothetical protein.
 
     0.539
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.