STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C806_03328Hypothetical protein. (499 aa)    
Predicted Functional Partners:
C806_03327
Spore germination protein (amino acid permease).
 
  
 0.966
C806_03326
Hypothetical protein.
 
  
 0.914
C806_00197
Stage V sporulation protein AD.
  
  
 0.808
C806_03314
Stage II sporulation protein R.
 
    0.799
C806_00209
Stage V sporulation protein AC.
  
  
 0.793
C806_00196
Stage V sporulation protein AE.
  
  
 0.780
gpr
GPR endopeptidase; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
  
 0.780
C806_01912
Stage II sporulation protein E.
  
   
 0.777
C806_02227
Hypothetical protein.
  
   
 0.777
C806_03791
Stage IV sporulation protein B.
  
     0.773
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.