Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene co-occurrence
gene fusions
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[Homology]
Score
rbsKRibokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (300 aa)    
Predicted Functional Partners:
C806_03389
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.990
C806_03390
Hypothetical protein.
 
  
 0.977
C806_03391
Hypothetical protein.
 
  
 0.939
C806_00170
PTS system, Fru family, IIC component.
    
 0.922
C806_01736
PTS system, Fru family, IIC component.
    
 0.922
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
   
 0.918
C806_03392
Hypothetical protein.
 
 0.914
C806_03302
Methyl-galactoside transport system ATP-binding protein.
 
  
 0.911
C806_04049
RpiB/LacA/LacB family sugar-phosphate isomerase.
    
 0.875
C806_01967
Ribose-phosphate diphosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family.
   
 0.864
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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