STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_03395Hypothetical protein. (336 aa)    
Predicted Functional Partners:
C806_03394
Hypothetical protein.
 
  
 
0.926
C806_01819
Nucleotide sugar dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
 
 0.770
C806_01028
Hypothetical protein; Belongs to the GHMP kinase family.
 
 0.745
lysS
lysine-tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.662
C806_03392
Hypothetical protein.
 
 
 0.644
C806_01463
Hypothetical protein.
 
 
 0.611
C806_02751
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing.
  
 
 0.570
C806_03396
Hypothetical protein.
 
     0.557
C806_03393
Hypothetical protein.
 
   
 0.508
C806_01811
Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.504
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.