STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_03403Hypothetical protein. (425 aa)    
Predicted Functional Partners:
C806_03404
Hypothetical protein.
 
  0.975
C806_04460
Hypothetical protein.
  
 0.954
C806_01453
Hypothetical protein.
 
  0.893
C806_00393
Hypothetical protein.
 
 
 0.890
C806_03451
PAS domain S-box protein.
 
 
0.878
C806_00135
Hypothetical protein.
  
 
 
0.862
C806_04293
Hypothetical protein.
  
  0.857
C806_00363
Hypothetical protein.
  
  0.852
C806_02950
Hypothetical protein.
 
  0.808
C806_03337
Hypothetical protein.
 
  0.802
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.