STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_03423Multiple sugar transport system permease. (281 aa)    
Predicted Functional Partners:
C806_03424
Multiple sugar transport system permease.
 
  0.984
C806_03425
Hypothetical protein.
 
 0.974
C806_01136
Maltose/maltodextrin transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.966
C806_02562
Hypothetical protein.
  
  0.913
C806_01214
Hypothetical protein.
  
  0.910
C806_04420
Hypothetical protein.
  
  0.906
C806_02927
Multiple sugar transport system permease; Overlaps another CDS with the same product name.
  
  0.904
C806_01335
lactose/L-arabinose transport system permease; Overlaps another CDS with the same product name.
  
  0.903
C806_02573
Multiple sugar transport system permease.
  
  0.903
C806_01953
Hypothetical protein.
  
  0.897
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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