STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C806_03426Hypothetical protein. (909 aa)    
Predicted Functional Partners:
C806_03427
Hypothetical protein.
 
  
 
0.978
C806_03979
Hypothetical protein.
     
 0.900
C806_04459
Hypothetical protein; Belongs to the glycosyl hydrolase 31 family.
     
 0.897
C806_01163
Hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.893
C806_01908
Hypothetical protein; Belongs to the glycosyl hydrolase 13 family.
     
 0.883
C806_03425
Hypothetical protein.
 
   
 0.865
C806_03422
Hypothetical protein.
 
  
 0.823
C806_03311
UTP-glucose-1-phosphate uridylyltransferase.
    
  0.822
C806_01919
Phosphoglucomutase.
    
 0.764
C806_01959
Phosphoglucomutase.
    
 0.764
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.