Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_03426Hypothetical protein. (909 aa)    
Predicted Functional Partners:
C806_03427
Hypothetical protein.
 
  
 
0.970
C806_01163
Hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.864
C806_03425
Hypothetical protein.
 
   
 0.863
C806_04459
Hypothetical protein; Belongs to the glycosyl hydrolase 31 family.
     
 0.859
C806_03979
Hypothetical protein.
     
 0.850
C806_01071
4-alpha-glucanotransferase.
     
  0.847
C806_01908
Hypothetical protein; Belongs to the glycosyl hydrolase 13 family.
     
 0.841
C806_03422
Hypothetical protein.
 
  
 0.814
C806_01835
Hypothetical protein.
     
 0.766
C806_03424
Multiple sugar transport system permease.
 
     0.764
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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