STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C806_03437Hypothetical protein. (338 aa)    
Predicted Functional Partners:
C806_03436
Hypothetical protein.
   0.942
C806_04460
Hypothetical protein.
 
0.925
C806_00393
Hypothetical protein.
 
 0.825
C806_04399
Hypothetical protein.
 
   0.808
C806_03626
Hypothetical protein.
 
   0.800
C806_03451
PAS domain S-box protein.
 
0.792
C806_03439
Hypothetical protein.
 
     0.780
C806_04293
Hypothetical protein.
 
   0.749
C806_03383
Hypothetical protein.
 
   0.729
C806_02241
Hypothetical protein.
  
 
 0.724
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.