STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C806_04041acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)    
Predicted Functional Partners:
C806_04040
3-hydroxybutyryl-CoA dehydrogenase.
 0.999
C806_01152
butyryl-CoA dehydrogenase.
  
 0.979
C806_04058
Hypothetical protein.
  
 0.976
C806_04521
3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.971
C806_04452
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 
 0.962
C806_04627
Hypothetical protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.952
C806_04039
butyryl-CoA dehydrogenase.
 
 0.951
C806_03234
carnitinyl-CoA dehydratase.
 
 0.949
C806_01098
butyryl-CoA dehydrogenase.
 
 0.919
C806_02712
butyryl-CoA dehydrogenase.
  
 0.908
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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