STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_04044UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (338 aa)    
Predicted Functional Partners:
C806_01028
Hypothetical protein; Belongs to the GHMP kinase family.
 
 0.989
galT
Galactose-1-phosphate uridylyltransferase.
  
 
 0.963
C806_04113
UDP-galactopyranose mutase.
    
 0.944
C806_03311
UTP-glucose-1-phosphate uridylyltransferase.
 
  
 0.934
C806_03057
Hypothetical protein; Converts alpha-aldose to the beta-anomer.
 
 
 0.909
C806_01856
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
    
 0.897
C806_01430
Hypothetical protein.
   
 0.858
C806_01865
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.841
C806_02737
Hypothetical protein.
   
 0.789
C806_02735
Glucose-1-phosphate cytidylyltransferase.
  
 
 0.776
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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