STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C806_04045Hypothetical protein. (372 aa)    
Predicted Functional Partners:
C806_04046
Hypothetical protein.
     0.981
C806_01380
Methionine synthase.
    
  0.868
C806_00625
D-galactosyl-beta-1-3-N-acetyl-D-hexosamine phosphorylase.
 
   
 0.753
C806_02239
Threonine synthase.
    
 0.608
C806_01765
Homoserine dehydrogenase.
    
 0.586
C806_04044
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
     
 0.545
C806_00980
Hypothetical protein.
  
 
  0.531
C806_01763
Aspartate kinase; Belongs to the aspartokinase family.
  
 
 0.514
C806_04458
Aspartate kinase; Belongs to the aspartokinase family.
  
 
 0.514
C806_00175
Branched-chain amino acid aminotransferase.
     
 0.507
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.