STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C806_04052Hypothetical protein. (415 aa)    
Predicted Functional Partners:
C806_02463
Hypothetical protein.
    
 0.813
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
  
  
 0.738
buk
Butyrate kinase; Belongs to the acetokinase family.
 
    0.668
C806_01087
Hypothetical protein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
    
 0.635
C806_04053
Hypothetical protein.
       0.608
C806_04054
Hypothetical protein.
       0.608
C806_04056
Phosphate acetyltransferase.
       0.608
C806_04057
Acyl carrier protein.
       0.608
C806_03464
Hypothetical protein.
  
 
 0.586
C806_00346
Ammonium transporter; Belongs to the P(II) protein family.
   
  
 0.580
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.