STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C806_04064Hypothetical protein. (495 aa)    
Predicted Functional Partners:
C806_04062
Hypothetical protein.
 0.999
C806_04452
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 0.999
C806_02579
Hypothetical protein.
  
 0.985
C806_04063
Hypothetical protein.
 
 0.980
C806_00245
Hydrolyase, tartrate alpha subunit/fumarate domain-containing protein, Fe-S type.
  
 
 0.931
C806_00244
Hydrolyase, tartrate beta subunit/fumarate domain-containing protein, Fe-S type.
  
 
 0.928
C806_02587
[FeFe] hydrogenase, group B1/B3.
  
 0.928
C806_02517
NADH-quinone oxidoreductase subunit F.
 
 0.886
C806_04059
Hypothetical protein.
 
 0.885
C806_04065
Hypothetical protein.
 
   
 0.883
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.