STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C806_04068Hypothetical protein. (119 aa)    
Predicted Functional Partners:
C806_04069
Hypothetical protein.
    0.997
C806_04070
Hypothetical protein.
 
    0.959
C806_04067
YlmC/YmxH family sporulation protein.
       0.773
C806_04074
Hypothetical protein.
 
    0.662
C806_02954
Hypothetical protein.
 
    0.591
C806_03503
Hypothetical protein.
 
    0.582
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
 
     0.523
C806_04071
MIP family channel protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
       0.480
C806_04065
Hypothetical protein.
       0.433
C806_04066
Hypothetical protein.
       0.433
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.