STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C806_04321Hypothetical protein. (957 aa)    
Predicted Functional Partners:
C806_04319
Hypothetical protein.
 
     0.953
C806_04320
Hypothetical protein.
 
     0.938
C806_04318
SrtB family sortase.
 
   
 0.907
C806_04322
Hypothetical protein.
 
  
 0.885
C806_03952
Flagellar motor switch protein FliN.
  
 
 0.879
C806_04785
Hypothetical protein.
 
    0.846
C806_04781
Hypothetical protein.
 
    0.835
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
  
 
  0.804
C806_04325
Hypothetical protein.
 
     0.797
C806_03182
Hypothetical protein.
  
  
 0.792
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.