STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C806_04463Hypothetical protein. (309 aa)    
Predicted Functional Partners:
C806_04062
Hypothetical protein.
    
  0.961
C806_04461
Hypothetical protein.
 
  0.931
C806_00576
Hypothetical protein.
 
 0.886
C806_04452
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
   
  0.853
C806_01461
Hypothetical protein.
  
  0.847
C806_02518
NADH-quinone oxidoreductase subunit E.
    
  0.847
C806_01663
Hypothetical protein.
 
  0.793
C806_04462
Hypothetical protein.
 
     0.789
C806_01426
Hypothetical protein.
  
  0.777
C806_02517
NADH-quinone oxidoreductase subunit F.
    
  0.773
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.