STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C806_04484MGT family glycosyltransferase. (399 aa)    
Predicted Functional Partners:
C806_00575
Hypothetical protein.
 
 
 0.931
C806_00576
Hypothetical protein.
 
 
 0.927
C806_04482
Hypothetical protein.
 
     0.763
C806_04483
Hypothetical protein.
 
     0.763
C806_04480
Hypothetical protein.
 
     0.669
C806_04481
Acyl carrier protein.
       0.577
C806_02013
Type 2 lantibiotic biosynthesis protein LanM.
  
     0.576
C806_04499
Hypothetical protein; Belongs to the P-Pant transferase superfamily.
 
     0.575
C806_04479
Beta-ketoacyl-acyl-carrier-protein synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  
 0.560
C806_02018
Type 2 lantibiotic biosynthesis protein LanM.
  
     0.520
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.