STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
uxuAMannonate dehydratase; Catalyzes the dehydration of D-mannonate. (356 aa)    
Predicted Functional Partners:
uxaC
Hypothetical protein.
 
  
 0.993
C806_04669
2-dehydro-3-deoxygluconokinase.
 
  
 0.921
C806_04535
Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.918
C806_04671
2-dehydro-3-deoxygluconokinase.
 
  
 0.871
C806_01124
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
     
 0.848
C806_04049
RpiB/LacA/LacB family sugar-phosphate isomerase.
     
  0.847
C806_03117
Hypothetical protein; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
     
  0.800
C806_04670
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase.
 
  
 0.789
C806_04540
Sugar (Glycoside-Pentoside-Hexuronide) transporter.
 
   
 0.772
C806_02423
Hypothetical protein.
    
 0.756
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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