STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C806_04539Hypothetical protein. (283 aa)    
Predicted Functional Partners:
C806_04538
beta-N-acetylhexosaminidase.
     0.957
C806_04540
Sugar (Glycoside-Pentoside-Hexuronide) transporter.
 
     0.809
C806_01732
PTS system, glucose subfamily, IIA component.
    
  0.703
C806_02198
PTS system, sucrose-specific IIBC component.
    
  0.703
C806_02407
PTS system, glucose subfamily, IIA component.
    
  0.703
C806_02528
PTS system, glucose subfamily, IIA component.
    
  0.703
C806_03518
PTS system, beta-glucoside-specific IIABC component.
    
  0.703
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.701
cinA
Competence/damage-inducible protein CinA domain; Belongs to the CinA family.
    
  0.685
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
       0.669
Your Current Organism:
Lachnospiraceae bacterium 31
NCBI taxonomy Id: 397288
Other names: L. bacterium 3-1, Lachnospiraceae bacterium 3-1
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